Serialized Form

Package org.mitre.synthea.engine

Class org.mitre.synthea.engine.Components.Attachment extends java.lang.Object implements Serializable

Serialized Fields

chart

ChartRenderer.PersonChartConfig chart

Configuration to generate a chart image.

contentType

java.lang.String contentType

Code for the MIME type of the content, with charset etc.

creation

java.lang.String creation

Date attachment was first created.

data

java.lang.String data

Data inline, base64 encoded.

duration

double duration

Length in seconds (audio/video).

frames

int frames

Number of frames if more than 1 (photo).

hash

java.lang.String hash

Hash of the data (SHA-1, base64 encoded).

height

int height

Height of the image in pixels (photo/video).

language

java.lang.String language

Human language of the content (BCP-47).

pages

int pages

Number of printed pages.

size

int size

Number of bytes of content (if URL provided).

title

java.lang.String title

Label to display in place of the data.

url

java.lang.String url

URI where the data can be found.

validated

java.lang.Boolean validated

Whether this Attachment has been validated.

width

int width

Width of the image in pixels (photo/video).

Class org.mitre.synthea.engine.Components.DateInput extends java.lang.Object implements Serializable

Serialized Fields

day

int day

The day component of the date.

hour

int hour

The hour component of the time.

millisecond

int millisecond

The millisecond component of the time.

minute

int minute

The minute component of the time.

month

int month

The month component of the date.

second

int second

The second component of the time.

year

int year

The year component of the date.

Class org.mitre.synthea.engine.Components.Exact extends java.lang.Object implements Serializable

Serialized Fields

quantity

T quantity

The fixed value.

Class org.mitre.synthea.engine.Components.ExactWithUnit extends Components.Exact<T> implements Serializable

Serialized Fields

unit

java.lang.String unit

Unit for the quantity (e.g., "days" if the quantity represents an amount of time).

Class org.mitre.synthea.engine.Components.Range extends java.lang.Object implements Serializable

Serialized Fields

decimals

java.lang.Integer decimals

Decimal places for value within the range.

high

R extends java.lang.Number high

Maximum value of the range.

low

R extends java.lang.Number low

Minimum value of the range.

Class org.mitre.synthea.engine.Components.RangeWithUnit extends Components.Range<R extends java.lang.Number> implements Serializable

Serialized Fields

unit

java.lang.String unit

Unit for the range (e.g., "years" if the range represents an amount of time).

Class org.mitre.synthea.engine.Components.SampledData extends java.lang.Object implements Serializable

Serialized Fields

attributes

java.util.List<java.lang.String> attributes

Person attributes containing TimeSeriesData objects.

decimalFormat

java.lang.String decimalFormat

Format for the output decimal numbers. See https://docs.oracle.com/javase/8/docs/api/java/text/DecimalFormat.html

factor

java.lang.Double factor

Multiply data by this before adding to origin.

lowerLimit

java.lang.Double lowerLimit

Lower limit of detection.

originValue

double originValue

Zero value.

series

java.util.List<TimeSeriesData> series

List of actual series data collections.

upperLimit

java.lang.Double upperLimit

Upper limit of detection.

Class org.mitre.synthea.engine.Distribution extends java.lang.Object implements Serializable

Serialized Fields

kind

Distribution.Kind kind

The type of distribution.

parameters

java.util.HashMap<java.lang.String,java.lang.Double> parameters

Parameters defining the distribution (e.g., mean, standard deviation).

round

java.lang.Boolean round

Whether the generated value should be rounded to the nearest integer.

Class org.mitre.synthea.engine.ExpressedConditionRecord extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686900L

Serialized Fields

person

Person person

The person in context

sources

java.util.Map<java.lang.String,ExpressedConditionRecord.ModuleConditions> sources

a map: module.name to Conditions

Class org.mitre.synthea.engine.ExpressedConditionRecord.ConditionPeriod extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686901L

Serialized Fields

endTime

java.lang.Long endTime

The time when the condition ended.

onsetTime

java.lang.Long onsetTime

The time when the condition started.

Class org.mitre.synthea.engine.ExpressedConditionRecord.ConditionWithSymptoms extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686904L

Serialized Fields

conditionName

java.lang.String conditionName

The name of the condition.

endTime

java.lang.Long endTime

The time when the condition ended.

onsetTime

java.lang.Long onsetTime

The time when the condition started.

symptoms

java.util.Map<java.lang.String,java.util.List<java.lang.Integer>> symptoms

A map of symptoms and their associated severity levels during the condition.

Class org.mitre.synthea.engine.ExpressedConditionRecord.ModuleConditions extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686903L

Serialized Fields

onsetConditions

java.util.Map<java.lang.String,ExpressedConditionRecord.OnsetCondition> onsetConditions

Data structure for storing onset conditions (init_time, end_time).

source

java.lang.String source

The source of the condition record.

state2conditionMapping

java.util.Map<java.lang.String,java.lang.String> state2conditionMapping

Data structure for storing mapping from state to condition names This is useful when facing ConditionEnd.conditionOnSet attribute

Class org.mitre.synthea.engine.ExpressedConditionRecord.OnsetCondition extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686902L

Serialized Fields

name

java.lang.String name

The name of the condition.

timeInfos

java.util.List<ExpressedConditionRecord.ConditionPeriod> timeInfos

A list of condition periods with associated time information.

Class org.mitre.synthea.engine.ExpressedSymptom extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686800L

Serialized Fields

name

java.lang.String name

The name of the symptom

sources

java.util.Map<java.lang.String,ExpressedSymptom.SymptomSource> sources

The sources of the expressed conditions.

Class org.mitre.synthea.engine.ExpressedSymptom.SymptomInfo extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686801L

Serialized Fields

cause

java.lang.String cause

The cause of the symptom.

time

java.lang.Long time

The time the symptom was set.

value

java.lang.Integer value

The value associated with the symptom.

Class org.mitre.synthea.engine.ExpressedSymptom.SymptomSource extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686802L

Serialized Fields

lastUpdateTime

java.lang.Long lastUpdateTime

when the expressed was last updated from the a given module

resolved

boolean resolved

what is the status from a given expressed symptom from a given module

source

java.lang.String source

From which module the expressed symptom was set

symptom

ExpressedSymptom symptom

The current instance of ExpressedSymptom

timeInfos

java.util.Map<java.lang.Long,ExpressedSymptom.SymptomInfo> timeInfos

the time on which the expressed symptom was updated and the associated info.

Class org.mitre.synthea.engine.Logic extends java.lang.Object implements Serializable

Serialized Fields

remarks

java.util.List<java.lang.String> remarks

Remarks or comments associated with the logic.

Class org.mitre.synthea.engine.Logic.ActiveAllergy extends org.mitre.synthea.engine.Logic.ActiveLogic implements Serializable

Class org.mitre.synthea.engine.Logic.ActiveCarePlan extends org.mitre.synthea.engine.Logic.ActiveLogic implements Serializable

Class org.mitre.synthea.engine.Logic.ActiveCondition extends org.mitre.synthea.engine.Logic.ActiveLogic implements Serializable

Class org.mitre.synthea.engine.Logic.ActiveMedication extends org.mitre.synthea.engine.Logic.ActiveLogic implements Serializable

Class org.mitre.synthea.engine.Logic.Age extends Logic implements Serializable

Serialized Fields

operator

java.lang.String operator

Operator for comparison

quantity

java.lang.Double quantity

Quantity of age to test against.

unit

java.lang.String unit

Unit of age (e.g., years, months).

Class org.mitre.synthea.engine.Logic.And extends org.mitre.synthea.engine.Logic.GroupedCondition implements Serializable

Class org.mitre.synthea.engine.Logic.AtLeast extends org.mitre.synthea.engine.Logic.GroupedCondition implements Serializable

Serialized Fields

minimum

java.lang.Integer minimum

The lower bound of sub-conditions that need to be true to return true

Class org.mitre.synthea.engine.Logic.AtMost extends org.mitre.synthea.engine.Logic.GroupedCondition implements Serializable

Serialized Fields

maximum

java.lang.Integer maximum

The max number of sub-conditions that can be true

Class org.mitre.synthea.engine.Logic.Attribute extends Logic implements Serializable

Serialized Fields

attribute

java.lang.String attribute

Attribute name

operator

java.lang.String operator

Comparison operator

value

java.lang.Object value

Value to compare the attribute to

Class org.mitre.synthea.engine.Logic.Date extends Logic implements Serializable

Serialized Fields

date

Components.DateInput date

Specific date to test against.

month

java.lang.Integer month

Month to test against.

operator

java.lang.String operator

Operator for comparison

year

java.lang.Integer year

Year to test against.

Class org.mitre.synthea.engine.Logic.False extends Logic implements Serializable

Class org.mitre.synthea.engine.Logic.Gender extends Logic implements Serializable

Serialized Fields

gender

java.lang.String gender

Gender to test against (e.g., M or F).

Class org.mitre.synthea.engine.Logic.Not extends Logic implements Serializable

Serialized Fields

condition

Logic condition

The condition to negate

Class org.mitre.synthea.engine.Logic.Observation extends Logic implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

List of codes to test against.

operator

java.lang.String operator

The comparison operator.

referencedByAttribute

java.lang.String referencedByAttribute

Attribute referencing the observation.

value

java.lang.Object value

Value to compare the observation against.

valueCode

HealthRecord.Code valueCode

Code representing the value to compare.

Class org.mitre.synthea.engine.Logic.Or extends org.mitre.synthea.engine.Logic.GroupedCondition implements Serializable

Class org.mitre.synthea.engine.Logic.PriorState extends Logic implements Serializable

Serialized Fields

name

java.lang.String name

Name of the prior state

since

java.lang.String since

Name of a state, cuts off the search when reached

window

java.lang.Long window

Converted value of the `within` variable

within

Components.ExactWithUnit<java.lang.Double> within

Max amount of time we'll look back at the history

Class org.mitre.synthea.engine.Logic.Race extends Logic implements Serializable

Serialized Fields

race

java.lang.String race

Race to test against.

Class org.mitre.synthea.engine.Logic.SocioeconomicStatus extends Logic implements Serializable

Serialized Fields

category

java.lang.String category

Socioeconomic category to test against (e.g., High, Middle, Low).

Class org.mitre.synthea.engine.Logic.Symptom extends Logic implements Serializable

Serialized Fields

operator

java.lang.String operator

The comparison operator

symptom

java.lang.String symptom

The symptom to test against

value

double value

The value to compare the person's symptom against

Class org.mitre.synthea.engine.Logic.True extends Logic implements Serializable

Class org.mitre.synthea.engine.Logic.VitalSign extends Logic implements Serializable

Serialized Fields

operator

java.lang.String operator

Comparator for the vital sign's value

value

double value

The value to compare against

vitalSign

org.mitre.synthea.world.concepts.VitalSign vitalSign

The vital sign to test against, like blood pressure

Class org.mitre.synthea.engine.Module extends java.lang.Object implements Serializable

Serialized Fields

gmfVersion

java.lang.Double gmfVersion

Version of the Generic Module Framework (GMF) used by this module.

name

java.lang.String name

Name of the module.

remarks

java.util.List<java.lang.String> remarks

List of remarks or comments associated with this module.

specialty

java.lang.String specialty

Specialty associated with the module, if any.

states

java.util.Map<java.lang.String,State> states

Map of state names to State objects for this module.

submodule

boolean submodule

True if this is a submodule, false otherwise.

submoduleName

java.lang.String submoduleName

If a submodule, the original name of this submodule. Otherwise null.

Class org.mitre.synthea.engine.ReactionProbabilities extends java.lang.Object implements Serializable

Serialized Fields

possibleSeverities

java.util.List<ReactionProbabilities.SeverityProbability> possibleSeverities

List of possible severities and their probabilities for the reaction.

reaction

HealthRecord.Code reaction

Code representing the type of reaction.

severityDistribution

org.apache.commons.math3.distribution.EnumeratedDistribution<java.lang.String> severityDistribution

Distribution used to sample reaction severities based on probabilities.

Class org.mitre.synthea.engine.ReactionProbabilities.SeverityProbability extends java.lang.Object implements Serializable

Serialized Fields

level

java.lang.String level

Severity level of the reaction (e.g., mild, moderate, severe).

value

float value

Probability of the severity level occurring.

Class org.mitre.synthea.engine.State extends java.lang.Object implements Serializable

Serialized Fields

complexTransition

java.util.List<Transition.ComplexTransitionOption> complexTransition

A list of complex transition options.

conditionalTransition

java.util.List<Transition.ConditionalTransitionOption> conditionalTransition

List of conditional transitions from this state

directTransition

java.lang.String directTransition

note that these are not Transition objects, because they are JSON lists

distributedTransition

java.util.List<Transition.DistributedTransitionOption> distributedTransition

A list of distributed transition options.

entered

java.lang.Long entered

The time the state was entered.

entry

HealthRecord.Entry entry

The entry associated with this state.

exited

java.lang.Long exited

The time the state was exited.

lookupTableTransition

java.util.List<Transition.LookupTableTransitionOption> lookupTableTransition

A list of lookup table transition options.

module

Module module

The module associated with this state.

name

java.lang.String name

The name of the state.

remarks

java.util.List<java.lang.String> remarks

Remarks associated with this state.

transition

Transition transition

The transition associated with this state.

typeOfCareTransition

Transition.TypeOfCareTransitionOptions typeOfCareTransition

Options for type of care transitions.

Class org.mitre.synthea.engine.State.AllergyEnd extends State implements Serializable

Serialized Fields

allergyOnset

java.lang.String allergyOnset

The name of the state this allergy was onset by

codes

java.util.List<HealthRecord.Code> codes

The codes of the allergy to end

referencedByAttribute

java.lang.String referencedByAttribute

The name of the attribute to which a previous AllergyOnset state assigned a condition

Class org.mitre.synthea.engine.State.AllergyOnset extends org.mitre.synthea.engine.State.OnsetState implements Serializable

Serialized Fields

allergyType

java.lang.String allergyType

The type of allergy

category

java.lang.String category

The category of allergy

reactions

java.util.List<ReactionProbabilities> reactions

A list of probabilities indicating how likely each reaction severity is

Class org.mitre.synthea.engine.State.CallSubmodule extends State implements Serializable

Serialized Fields

submodule

java.lang.String submodule

the name of the submodule to call

Class org.mitre.synthea.engine.State.CarePlanEnd extends State implements Serializable

Serialized Fields

careplan

java.lang.String careplan

The name of the CarePlanStart in which this CarePlan was prescribed

codes

java.util.List<HealthRecord.Code> codes

The codes of the CarePlan to end

referencedByAttribute

java.lang.String referencedByAttribute

The attribute to which a CarePlanStart state assigned a care plan

Class org.mitre.synthea.engine.State.CarePlanStart extends org.mitre.synthea.engine.State.AttributeAssignableState implements Serializable

Serialized Fields

activities

java.util.List<HealthRecord.Code> activities

The activities listed in the CarePlan

codes

java.util.List<HealthRecord.Code> codes

The codes associated with the CarePlan

reason

java.lang.String reason

The reason for starting this CarePlan

Class org.mitre.synthea.engine.State.ConditionEnd extends State implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

Codes of the condition to end

conditionOnset

java.lang.String conditionOnset

The onset state that caused the condition that's ending

referencedByAttribute

java.lang.String referencedByAttribute

The attirbute that a ConditionOnset state assigned a condition

Class org.mitre.synthea.engine.State.ConditionOnset extends org.mitre.synthea.engine.State.OnsetState implements Serializable

Class org.mitre.synthea.engine.State.Counter extends State implements Serializable

Serialized Fields

action

java.lang.String action

Whether this counter increments or decrements

amount

int amount

The current count

attribute

java.lang.String attribute

The numeric attribute on the patient

increment

boolean increment

Indicates whether the action is increment or decrement

Class org.mitre.synthea.engine.State.Death extends State implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

Codes of the conditions causing death

conditionOnset

java.lang.String conditionOnset

The name of the state which onset the condition causing death

exact

Components.ExactWithUnit<java.lang.Double> exact

The exact time of death

range

Components.RangeWithUnit<java.lang.Double> range

A range of time between which the person will die

referencedByAttribute

java.lang.String referencedByAttribute

Attribute assigned a condition that caused death

Class org.mitre.synthea.engine.State.Delay extends State.Delayable implements Serializable

Serialized Fields

distribution

Distribution distribution

Random distribution from which to get a random delay time from (For GMF 2.0 Support)

exact

Components.ExactWithUnit<java.lang.Double> exact

An exact amount of time to delay state transition

range

Components.RangeWithUnit<java.lang.Double> range

The range of time over which to delay (For GMF 1.0 Support)

unit

java.lang.String unit

Unit of time for the delay

Class org.mitre.synthea.engine.State.Delayable extends State implements Serializable

Serialized Fields

next

java.lang.Long next

next is "transient" in the sense that it represents object state as opposed to the other fields which represent object definition hence it is unset in clone()

Class org.mitre.synthea.engine.State.Device extends org.mitre.synthea.engine.State.AttributeAssignableState implements Serializable

Serialized Fields

code

HealthRecord.Code code

Code of the device

manufacturer

java.lang.String manufacturer

Manufacturer of the device

model

java.lang.String model

Model of the device

Class org.mitre.synthea.engine.State.DeviceEnd extends State implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

Codes indicating the device to remove

device

java.lang.String device

The name of the device that is being removed

referencedByAttribute

java.lang.String referencedByAttribute

Attribute containing the device to remove

Class org.mitre.synthea.engine.State.DiagnosticReport extends org.mitre.synthea.engine.State.ObservationGroup implements Serializable

Class org.mitre.synthea.engine.State.Encounter extends State implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

The codes for the encounter

encounterClass

java.lang.String encounterClass

The type of encounter (virtual, ambulatory, emergency, etc)

reason

java.lang.String reason

The reason for having the encounter

telemedicinePossibility

java.lang.String telemedicinePossibility

Always, sometimes, or never possible for a telemedicine encounter

wellness

boolean wellness

whether this is a wellness encounter

Class org.mitre.synthea.engine.State.EncounterEnd extends State implements Serializable

Serialized Fields

dischargeDisposition

HealthRecord.Code dischargeDisposition

Code indicating the person's status upon being discharged

Class org.mitre.synthea.engine.State.Guard extends State implements Serializable

Serialized Fields

allow

Logic allow

Logic which dictates whether the module will continue to the next state

Class org.mitre.synthea.engine.State.ImagingStudy extends State implements Serializable

Serialized Fields

maxNumberSeries

int maxNumberSeries

Max number of the series

minNumberSeries

int minNumberSeries

Minimum and maximum number of series in this study. Actual number is picked uniformly randomly from this range, copying series data from the first series provided.

procedureCode

HealthRecord.Code procedureCode

The equivalent SNOMED codes that describe this ImagingStudy as a Procedure.

series

java.util.List<HealthRecord.ImagingStudy.Series> series

The Series of Instances that represent this ImagingStudy.

Class org.mitre.synthea.engine.State.Initial extends State implements Serializable

Class org.mitre.synthea.engine.State.LegacyStateWithUnitlessRV extends State implements Serializable

Serialized Fields

exact

Components.Exact exact

The exact value of the random variable.

range

Components.Range range

The range of the random variable.

Class org.mitre.synthea.engine.State.MedicationEnd extends State implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

The codes of the medications to end

medicationOrder

java.lang.String medicationOrder

The MedicationOrder state in which the medication was prescribed

referencedByAttribute

java.lang.String referencedByAttribute

The name of the attribute a previous MedicationOrder assigned a medication

Class org.mitre.synthea.engine.State.MedicationOrder extends org.mitre.synthea.engine.State.AttributeAssignableState implements Serializable

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream ois)
                 throws java.lang.ClassNotFoundException,
                        java.io.IOException

Java Serialization support method to deserialize the JsonObject prescription which isn't natively serializable.

Throws:

java.lang.ClassNotFoundException - if JSON object conversion fails

java.io.IOException - if the object fails to be deserialized

writeObject

private void writeObject(java.io.ObjectOutputStream oos)
                  throws java.io.IOException

Java Serialization support method to serialize the JsonObject prescription which isn't natively serializable.

Throws:

java.io.IOException - if the object fails to be serialized

Serialized Fields

administration

boolean administration

Whether to administer this medication

chronic

boolean chronic

Whether this order is repeated

codes

java.util.List<HealthRecord.Code> codes

The codes for this medication

prescription

com.google.gson.JsonObject prescription

Prescription object

reason

java.lang.String reason

The reason this medication is being ordered

Class org.mitre.synthea.engine.State.MultiObservation extends org.mitre.synthea.engine.State.ObservationGroup implements Serializable

Serialized Fields

category

java.lang.String category

The category of the observation

Class org.mitre.synthea.engine.State.Observation extends State.LegacyStateWithUnitlessRV implements Serializable

Serialized Fields

attachment

Components.Attachment attachment

Attachment put on the observation

attribute

java.lang.String attribute

Associated attribute

category

java.lang.String category

The category of observation (see above)

codes

java.util.List<HealthRecord.Code> codes

Codes associated with this observation

distribution

Distribution distribution

Distribution of the random value generator

expression

java.lang.String expression

CQL expression that sets the value

sampledData

Components.SampledData sampledData

Potential value for this observation

unit

java.lang.String unit

The unit of the value

valueCode

HealthRecord.Code valueCode

Default value for the observation

vitalSign

org.mitre.synthea.world.concepts.VitalSign vitalSign

The vital sign measured by this observation

Class org.mitre.synthea.engine.State.Physiology extends State implements Serializable

Serialized Fields

altDirectTransition

java.lang.String altDirectTransition

An alternative direct transition.

altTransition

Transition altTransition

An alternative transition for the simulation.

inputs

java.util.List<IoMapper> inputs

A list of input mappings for the simulation.

leadTime

double leadTime

The lead time for the simulation.

model

java.lang.String model

The name of the physiology model.

outputs

java.util.List<IoMapper> outputs

A list of output mappings for the simulation.

simDuration

double simDuration

The duration of the simulation.

solver

java.lang.String solver

The solver used for the simulation.

stepSize

double stepSize

The step size for the simulation.

Class org.mitre.synthea.engine.State.Procedure extends State.Delayable implements Serializable

Serialized Fields

assignToAttribute

java.lang.String assignToAttribute

Which attribute to assign this procedure to

codes

java.util.List<HealthRecord.Code> codes

The codes associated with this procedure

distribution

Distribution distribution

For GMF 2.0 Support

duration

Components.RangeWithUnit<java.lang.Long> duration

For GMF 1.0 Support

reason

java.lang.String reason

The reason for doing this procedure

stop

java.lang.Long stop

The time at which this procedure stops

unit

java.lang.String unit

The unit of time for the duration of the procedure

Class org.mitre.synthea.engine.State.SetAttribute extends State implements Serializable

Serialized Fields

attribute

java.lang.String attribute

The attribute to set

distribution

Distribution distribution

The distribution to create random values from (For GMF 2.0 Support)

expression

java.lang.String expression

CQL expression to evaluate to set the value

period

double period

The number of seconds between samples in a series of data

range

Components.Range<java.lang.Double> range

The range for the value of the attribute

seriesData

java.lang.String seriesData

Series data to set as the value

value

java.lang.Object value

The value of the attribute (For GMF 1.0 support)

valueAttribute

java.lang.String valueAttribute

When the value of the attribute should be the value of another attribute.

valueCode

HealthRecord.Code valueCode

The code of the value

Class org.mitre.synthea.engine.State.Simple extends State implements Serializable

Class org.mitre.synthea.engine.State.SupplyList extends State implements Serializable

Serialized Fields

supplies

java.util.List<org.mitre.synthea.engine.State.SupplyList.SupplyComponent> supplies

List of components making up this supply list

Class org.mitre.synthea.engine.State.Symptom extends State.LegacyStateWithUnitlessRV implements Serializable

Serialized Fields

addressed

boolean addressed

Whether the symptom has been addressed

cause

java.lang.String cause

The name of the cause of the symptom

distribution

Distribution distribution

Distribution for the random value generator

probability

java.lang.Double probability

The probability that the symptom is caused

symptom

java.lang.String symptom

The symptom this state tracks

Class org.mitre.synthea.engine.State.Terminal extends State implements Serializable

Class org.mitre.synthea.engine.State.Vaccine extends State implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

Codes representing the vaccine(s) in the person's immunization record

series

int series

The series number of the vaccine. This is used to track the number of doses

Class org.mitre.synthea.engine.State.VitalSign extends State.LegacyStateWithUnitlessRV implements Serializable

Serialized Fields

distribution

Distribution distribution

The distribution for the random value generation

expression

java.lang.String expression

An expression to be executed on a person

unit

java.lang.String unit

The unit of the vital sign's value

vitalSign

org.mitre.synthea.world.concepts.VitalSign vitalSign

The in-house representation of the Vital Sign

Class org.mitre.synthea.engine.Transition extends java.lang.Object implements Serializable

Serialized Fields

remarks

java.util.List<java.lang.String> remarks

Remarks associated with the transition.

Class org.mitre.synthea.engine.Transition.ComplexTransition extends Transition implements Serializable

Serialized Fields

transitions

java.util.List<Transition.ComplexTransitionOption> transitions

List of transitions to choose from, each with a condition or distributions.

Class org.mitre.synthea.engine.Transition.ComplexTransitionOption extends org.mitre.synthea.engine.Transition.TransitionOption implements Serializable

Serialized Fields

condition

Logic condition

Conditional logic gating transition

distributions

java.util.List<Transition.DistributedTransitionOption> distributions

List of transition options weighted by a percentage chance

Class org.mitre.synthea.engine.Transition.ConditionalTransition extends Transition implements Serializable

Serialized Fields

transitions

java.util.List<Transition.ConditionalTransitionOption> transitions

List of transitions to choose from, each with a condition. The last transition may not have a condition, and will be used as a fallback.

Class org.mitre.synthea.engine.Transition.ConditionalTransitionOption extends org.mitre.synthea.engine.Transition.TransitionOption implements Serializable

Serialized Fields

condition

Logic condition

Conditional logic gating transition.

Class org.mitre.synthea.engine.Transition.DirectTransition extends Transition implements Serializable

Serialized Fields

transition

java.lang.String transition

The name of the state to transition to.

Class org.mitre.synthea.engine.Transition.DistributedTransition extends Transition implements Serializable

Serialized Fields

transitions

java.util.List<Transition.DistributedTransitionOption> transitions

List of transitions to choose from, each with a distribution. The distribution values should sum up to 1.0.

Class org.mitre.synthea.engine.Transition.DistributedTransitionOption extends org.mitre.synthea.engine.Transition.TransitionOption implements Serializable

Serialized Fields

distribution

java.lang.Object distribution

The distribution for this transition. This may be a double, or a NamedDistribution.

namedDistribution

Transition.NamedDistribution namedDistribution

The named distribution, if distribution is named

numericDistribution

java.lang.Double numericDistribution

The numeric distribution value, if distribution is a double.

Class org.mitre.synthea.engine.Transition.LookupTableKey extends java.lang.Object implements Serializable

Serialized Fields

age

java.lang.Integer age

Age for this patient. May be null if lookup table does not use age.

ageRange

org.apache.commons.lang3.Range<java.lang.Integer> ageRange

Age range for this row. Null if this is a person.

attributes

java.util.List<java.lang.String> attributes

Attributes for this key.

time

java.lang.Long time

Time in the simulation

timeRange

org.apache.commons.lang3.Range<java.lang.Long> timeRange

Time range for this row.

Class org.mitre.synthea.engine.Transition.LookupTableTransition extends Transition implements Serializable

Serialized Fields

attributes

java.util.List<java.lang.String> attributes

List of attributes for this transition

defaultTransitions

java.util.List<Transition.DistributedTransitionOption> defaultTransitions

Default transition options

lookupTableName

java.lang.String lookupTableName

The name of the lookup table to use for this transition

transitions

java.util.List<Transition.LookupTableTransitionOption> transitions

List of options for transitioning to

Class org.mitre.synthea.engine.Transition.LookupTableTransitionOption extends org.mitre.synthea.engine.Transition.TransitionOption implements Serializable

Serialized Fields

defaultProbability

double defaultProbability

The default probability for this transition if no attributes match

lookupTableName

java.lang.String lookupTableName

The name of the lookup table to use for this transition

Class org.mitre.synthea.engine.Transition.NamedDistribution extends java.lang.Object implements Serializable

Serialized Fields

attribute

java.lang.String attribute

The attribute to fetch the distribution from, if applicable.

defaultDistribution

double defaultDistribution

The default distribution value to use if the attribute is not present.

Class org.mitre.synthea.engine.Transition.TypeOfCareTransition extends Transition implements Serializable

Serialized Fields

ambulatory

java.lang.String ambulatory

Ambulatory care

config

TelemedicineConfig config

The telemedicine configuration

emergency

java.lang.String emergency

Emergency care

telemedicine

java.lang.String telemedicine

Telemedicine care

Class org.mitre.synthea.engine.Transition.TypeOfCareTransitionOptions extends java.lang.Object implements Serializable

Serialized Fields

ambulatory

java.lang.String ambulatory

Ambulatory care

emergency

java.lang.String emergency

Emergency care

telemedicine

java.lang.String telemedicine

Telemedicine care

Package org.mitre.synthea.helpers

Class org.mitre.synthea.helpers.ChartRenderer.ChartConfig extends java.lang.Object implements Serializable

Serialized Fields

axisHiddenX

boolean axisHiddenX

Whether the X Axis is visible.

axisHiddenY

boolean axisHiddenY

Whether the Y Axis is visible.

axisLabelX

java.lang.String axisLabelX

X axis label.

axisLabelY

java.lang.String axisLabelY

Y axis label.

filename

java.lang.String filename

Name of the image file to export.

height

int height

Chart height in pixels.

title

java.lang.String title

Chart title.

type

java.lang.String type

User input for the type of chart to render.

width

int width

Chart width in pixels.

Class org.mitre.synthea.helpers.ChartRenderer.MultiTableChartConfig extends ChartRenderer.ChartConfig implements Serializable

Serialized Fields

axisParamX

java.lang.String axisParamX

Parameter to render on the x axis.

endTime

double endTime

Simulation time in seconds to end charting points.

series

java.util.List<ChartRenderer.MultiTableSeriesConfig> series

List of series configurations for this chart.

startTime

double startTime

Simulation time in seconds to start charting points.

Class org.mitre.synthea.helpers.ChartRenderer.MultiTableSeriesConfig extends org.mitre.synthea.helpers.ChartRenderer.SeriesConfig implements Serializable

Serialized Fields

param

java.lang.String param

Which parameter to plot on this series. (if providing a MultiTable)

Class org.mitre.synthea.helpers.ChartRenderer.PersonChartConfig extends ChartRenderer.ChartConfig implements Serializable

Serialized Fields

axisAttributeX

java.lang.String axisAttributeX

Person attribute to render on the x axis.

series

java.util.List<ChartRenderer.PersonSeriesConfig> series

List of series configurations for this chart.

Class org.mitre.synthea.helpers.ChartRenderer.PersonSeriesConfig extends org.mitre.synthea.helpers.ChartRenderer.SeriesConfig implements Serializable

Serialized Fields

attribute

java.lang.String attribute

Which attribute to plot on this series. (if providing a Person)

Class org.mitre.synthea.helpers.ConstantValueGenerator extends ValueGenerator implements Serializable

Serialized Fields

value

double value

The value this generator generates

Class org.mitre.synthea.helpers.DefaultRandomNumberGenerator extends java.lang.Object implements Serializable

Serialized Fields

count

java.util.concurrent.atomic.AtomicLong count

Thread safe counter for how many times this generator is called

random

java.util.Random random

Java's pseudorandom number generator

seed

long seed

The starting value of the generator

Class org.mitre.synthea.helpers.PhysiologyValueGenerator extends ValueGenerator implements Serializable

Serialized Fields

config

PhysiologyGeneratorConfig config

Configuration for the physiology generator.

outputVariance

double outputVariance

Variance applied to the generated output values, represented as a multiplier that amplifies a random number

preGenerator

ValueGenerator preGenerator

Pre-simulation generator for initial values, if the sim hasn't run yet

simRunner

SimRunner simRunner

Simulator runner for executing physiology models.

vitalSign

org.mitre.synthea.world.concepts.VitalSign vitalSign

Vital sign targeted by this generator.

Class org.mitre.synthea.helpers.RandomCollection extends java.lang.Object implements Serializable

Serialized Fields

map

java.util.TreeMap<java.lang.Double,E> map

A collection of objects (results) that can be selected at random based on their associated weights.

total

double total

The total weight of all objects in the collection.

Class org.mitre.synthea.helpers.RandomValueGenerator extends ValueGenerator implements Serializable

Serialized Fields

distribution

Distribution distribution

The distribution used to generate random values. Typically a uniform distribution with low and high bounds.

Class org.mitre.synthea.helpers.SyncedEnumeratedDistro extends org.apache.commons.math3.distribution.EnumeratedDistribution implements Serializable

Class org.mitre.synthea.helpers.TimeSeriesData extends java.lang.Object implements Serializable

Serialized Fields

period

double period

number of seconds between samples

values

java.util.List<java.lang.Double> values

Provides a collection of time series values as well as sampling metadata concerning those values.

Class org.mitre.synthea.helpers.TrendingValueGenerator extends ValueGenerator implements Serializable

Serialized Fields

beginMean

double beginMean

Mean value at the beginning of the time range.

beginTime

long beginTime

Start time for the value generation.

endMean

double endMean

Mean value at the end of the time range.

endTime

long endTime

End time for the value generation.

maximumValue

java.lang.Double maximumValue

Maximum bound for the generated values.

minimumValue

java.lang.Double minimumValue

Minimum bound for the generated values.

standardDeviation

double standardDeviation

Standard deviation of the generated values.

Class org.mitre.synthea.helpers.ValueGenerator extends java.lang.Object implements Serializable

Serialized Fields

person

Person person

The person associated with this value generator

Package org.mitre.synthea.helpers.physiology

Class org.mitre.synthea.helpers.physiology.IoMapper extends java.lang.Object implements Serializable

Serialized Fields

from

java.lang.String from

Source field for mapping.

fromExp

java.lang.String fromExp

Expression for mapping.

fromList

java.lang.String fromList

Source list for mapping.

preGenerator

PreGenerator preGenerator

PreGenerator instance for pre-simulation outputs.

to

java.lang.String to

Target field for mapping.

type

IoMapper.IoType type

Type of input/output mapping.

variance

double variance

Variance threshold for mapping.

vitalSign

org.mitre.synthea.world.concepts.VitalSign vitalSign

Vital sign associated with the mapping.

Class org.mitre.synthea.helpers.physiology.PreGenerator extends java.lang.Object implements Serializable

Serialized Fields

args

java.util.List<PreGenerator.PreGeneratorArg> args

List of arguments to pass to the generator's constructor.

className

java.lang.String className

Fully qualified class name for the generator.

Package org.mitre.synthea.modules

Class org.mitre.synthea.modules.BloodPressureValueGenerator extends ValueGenerator implements Serializable

Serialized Fields

cachedValue

java.lang.Double cachedValue

Cached blood pressure value for consistency.

cacheTime

long cacheTime

Timestamp of the cached blood pressure value.

sysDias

BloodPressureValueGenerator.SysDias sysDias

Indicates whether the value is systolic or diastolic.

Class org.mitre.synthea.modules.CardiovascularDiseaseModule extends Module implements Serializable

Class org.mitre.synthea.modules.EncounterModule extends Module implements Serializable

Class org.mitre.synthea.modules.HealthInsuranceModule extends Module implements Serializable

Class org.mitre.synthea.modules.LifecycleModule extends Module implements Serializable

Class org.mitre.synthea.modules.QualityOfLifeModule extends Module implements Serializable

Class org.mitre.synthea.modules.WeightLossModule extends Module implements Serializable

Package org.mitre.synthea.modules.covid

Class org.mitre.synthea.modules.covid.C19ImmunizationModule extends Module implements Serializable

Class org.mitre.synthea.modules.covid.LateAdopterModel extends java.lang.Object implements Serializable

Serialized Fields

chanceOfGettingShot

double chanceOfGettingShot

The chance that the person will get the vaccine

lastUpdated

long lastUpdated

The time in weeks that the person was last processed

Package org.mitre.synthea.world.agents

Class org.mitre.synthea.world.agents.Clinician extends java.lang.Object implements Serializable

serialVersionUID:

1370111157423846567L

Serialized Fields

attributes

java.util.Map<java.lang.String,java.lang.Object> attributes

Attributes of the clinician, such as name, gender, and specialty.

encounters

int encounters

Number of encounters performed by the clinician.

identifier

long identifier

Unique identifier for the clinician.

npi

java.lang.String npi

National Provider Identifier (NPI) for the clinician.

organization

Provider organization

Organization to which the clinician belongs.

populationSeed

long populationSeed

Seed for generating random values for the clinician.

procedures

int procedures

Number of procedures performed by the clinician.

servicesProvided

java.util.ArrayList<java.lang.String> servicesProvided

List of services provided by the clinician.

uuid

java.lang.String uuid

Universally unique identifier (UUID) for the clinician.

Class org.mitre.synthea.world.agents.Payer extends java.lang.Object implements Serializable

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream ois)
                 throws java.lang.ClassNotFoundException,
                        java.io.IOException

Java Serialization support for the entryUtilization field.

Throws:

java.lang.ClassNotFoundException - if a class cannot be found

java.io.IOException - if an I/O error occurs

writeObject

private void writeObject(java.io.ObjectOutputStream oos)
                  throws java.io.IOException

Java Serialization support for the entryUtilization field.

Throws:

java.io.IOException - if an I/O error occurs

Serialized Fields

attributes

java.util.Map<java.lang.String,java.lang.Object> attributes

Payer Attributes.

costsCovered

java.math.BigDecimal costsCovered

Costs covered by the payer.

costsUncovered

java.math.BigDecimal costsUncovered

Costs not covered by the payer.

customerUtilization

java.util.Map<java.lang.String,java.util.concurrent.atomic.AtomicInteger> customerUtilization

Unique utilizers of Payer, by Person ID, with number of utilizations per Person.

name

java.lang.String name

Name of the payer organization.

ownership

java.lang.String ownership

Ownership type of the payer.

payerAdjustment

IPayerAdjustment payerAdjustment

Payer Adjustment strategy.

planLinkId

int planLinkId

Identifier linking the payer to its plans.

plans

java.util.List<InsurancePlan> plans

List of insurance plans offered by the payer.

revenue

java.math.BigDecimal revenue

Revenue generated by the payer.

statesCovered

java.util.Set<java.lang.String> statesCovered

The States that this payer covers and operates in.

totalQOLS

double totalQOLS

Total quality of life scores for all customers.

uuid

java.lang.String uuid

Universally unique identifier for the payer.

Class org.mitre.synthea.world.agents.Person extends java.lang.Object implements Serializable

serialVersionUID:

4322116644425686379L

Serialized Fields

attributes

java.util.Map<java.lang.String,java.lang.Object> attributes

Map of attributes for the person.

chronicMedications

java.util.Map<java.lang.String,HealthRecord.Medication> chronicMedications

Map of chronic medications for the person.

coverage

CoverageRecord coverage

Record of insurance coverage.

currentModules

java.util.List<Module> currentModules

Tracks the remaining modules for a person over a serialize/deserialize.

defaultRecord

HealthRecord defaultRecord

Default health record. If "lossOfCareEnabled" is true, this is also the record with entries that were covered by insurance.

hasMultipleRecords

boolean hasMultipleRecords

Flag that enables each provider having a different health record for each patient. In other words, the patients entire record is split across provider systems.

history

java.util.List<State> history

History of the currently active module.

lastUpdated

long lastUpdated

Tracks the last time that the person was updated over a serialize/deserialize.

lossOfCareEnabled

boolean lossOfCareEnabled

Experimental feature flag. When "lossOfCareEnabled" is true, patients can miss care due to cost or lack of health insurance coverage.

lossOfCareRecord

HealthRecord lossOfCareRecord

Only used if "lossOfCareEnabled" is true. In that case, this health record contains entries that should have, but did not, occur.

onsetConditionRecord

ExpressedConditionRecord onsetConditionRecord

Data structure for storing onset conditions (init_time, end_time).

populationSeed

long populationSeed

The random number generator seed for generating the population

random

DefaultRandomNumberGenerator random

The random number generator to default to

record

HealthRecord record

The active health record.

records

java.util.Map<java.lang.String,HealthRecord> records

Individual provider health records (if "hasMultipleRecords" is enabled).

symptoms

java.util.Map<java.lang.String,ExpressedSymptom> symptoms

Data structure for storing symptoms faced by a person. Adding the Long keyset to keep track of the time a symptom is set.

vitalSigns

java.util.Map<org.mitre.synthea.world.concepts.VitalSign,ValueGenerator> vitalSigns

Map of vital signs to their value generators.

Class org.mitre.synthea.world.agents.Provider extends java.lang.Object implements Serializable

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream ois)
                 throws java.lang.ClassNotFoundException,
                        java.io.IOException

Java Serialization support for the utilization field.

Throws:

java.lang.ClassNotFoundException - if the class of a serialized object cannot be found

java.io.IOException - if the object can't be read

writeObject

private void writeObject(java.io.ObjectOutputStream oos)
                  throws java.io.IOException

Java Serialization support for the utilization field.

Throws:

java.io.IOException - if the object can't be written

Serialized Fields

address

java.lang.String address

Address of the provider.

attributes

java.util.Map<java.lang.String,java.lang.Object> attributes

Map of provider attributes.

bedCount

java.lang.Integer bedCount

Number of beds available at the provider.

city

java.lang.String city

City where the provider is located.

cliaNumber

java.lang.String cliaNumber

CLIA number.

clinicianMap

java.util.Map<java.lang.String,java.util.ArrayList<Clinician>> clinicianMap

Map of clinicians categorized by their specialties.

cmsCategory

java.lang.String cmsCategory

CMS category.

cmsPin

java.lang.String cmsPin

CMS PIN.

cmsProviderNum

java.lang.String cmsProviderNum

CMS provider number.

cmsProviderType

java.lang.String cmsProviderType

CMS provider type.

cmsRegion

java.lang.String cmsRegion

CMS region.

cmsUpin

java.lang.String cmsUpin

CMS UPIN.

coordinates

java.awt.geom.Point2D.Double coordinates

Geographic coordinates of the provider.

fipsCountyCode

java.lang.String fipsCountyCode

FIPS county code of the provider's location.

id

java.lang.String id

Identifier for the provider.

institutional

boolean institutional

institutional (e.g. hospital) else professional (e.g. PCP)

location

Location location

Location of the provider.

locationUuid

java.lang.String locationUuid

Unique identifier for the provider's location.

name

java.lang.String name

Name of the provider.

npi

java.lang.String npi

National Provider Identifier (NPI).

ownership

java.lang.String ownership

Ownership type of the provider.

phone

java.lang.String phone

Phone number of the provider.

revenue

double revenue

Revenue generated by the provider.

servicesProvided

java.util.Set<HealthRecord.EncounterType> servicesProvided

Set of services provided by the provider.

state

java.lang.String state

State where the provider is located.

type

Provider.ProviderType type

Type of the provider.

uuid

java.lang.String uuid

Unique identifier for the provider.

zip

java.lang.String zip

ZIP code of the provider's location.

Package org.mitre.synthea.world.agents.behaviors.payeradjustment

Class org.mitre.synthea.world.agents.behaviors.payeradjustment.PayerAdjustmentFixed extends java.lang.Object implements Serializable

serialVersionUID:

-1515831606680338099L

Serialized Fields

rate

double rate

Fixed adjustment rate.

Class org.mitre.synthea.world.agents.behaviors.payeradjustment.PayerAdjustmentNone extends java.lang.Object implements Serializable

serialVersionUID:

3288715364746907944L

Class org.mitre.synthea.world.agents.behaviors.payeradjustment.PayerAdjustmentRandom extends java.lang.Object implements Serializable

serialVersionUID:

-5292509643177122361L

Serialized Fields

rate

double rate

Maximum adjustment rate.

Package org.mitre.synthea.world.agents.behaviors.planeligibility

Class org.mitre.synthea.world.agents.behaviors.planeligibility.CSVEligibility extends java.lang.Object implements Serializable

Serialized Fields

eligibilityCriteria

java.util.List<IPlanEligibility> eligibilityCriteria

List of all elibigility criteria that apply

eligibilityLogic

java.util.function.BiFunction<Person,java.lang.Long,java.lang.Boolean> eligibilityLogic

An eligibility logic function that takes a person and the current time.

Class org.mitre.synthea.world.agents.behaviors.planeligibility.DefaultPlanEligibility extends java.lang.Object implements Serializable

Class org.mitre.synthea.world.agents.behaviors.planeligibility.IncomeSpenddownEligibility extends java.lang.Object implements Serializable

Class org.mitre.synthea.world.agents.behaviors.planeligibility.PovertyMultiplierFileEligibility extends java.lang.Object implements Serializable

Class org.mitre.synthea.world.agents.behaviors.planeligibility.QualifyingAttributesEligibility extends java.lang.Object implements Serializable

Serialized Fields

qualifyingAttributes

java.util.List<org.mitre.synthea.world.agents.behaviors.planeligibility.QualifyingAttributesEligibility.AttributeQualifier> qualifyingAttributes

A list of logical expressions that qualify a person for this eligibility type.

Class org.mitre.synthea.world.agents.behaviors.planeligibility.QualifyingConditionCodesEligibility extends java.lang.Object implements Serializable

Serialized Fields

qualifyingCodes

java.util.List<java.lang.String> qualifyingCodes

A list that maintains the qualifying codes for this instance of an eligibility criteria.

Package org.mitre.synthea.world.concepts

Class org.mitre.synthea.world.concepts.Claim extends java.lang.Object implements Serializable

serialVersionUID:

-3565704321813987656L

Serialized Fields

items

java.util.List<Claim.ClaimEntry> items

Additional items in the claim.

mainEntry

Claim.ClaimEntry mainEntry

The main entry of the claim.

person

Person person

The person associated with this claim.

planRecord

PlanRecord planRecord

The plan record associated with the claim.

totals

Claim.ClaimEntry totals

Totals for the claim.

uuid

java.util.UUID uuid

Unique identifier for the claim.

Class org.mitre.synthea.world.concepts.Claim.ClaimCost extends java.lang.Object implements Serializable

serialVersionUID:

1L

Serialized Fields

adjustment

java.math.BigDecimal adjustment

Amount the charge was decreased by payer adjustment.

coinsurancePaidByPayer

java.math.BigDecimal coinsurancePaidByPayer

Coinsurance paid by the payer.

copayPaidByPatient

java.math.BigDecimal copayPaidByPatient

Copay paid by the patient.

cost

java.math.BigDecimal cost

Total cost of the entry.

deductiblePaidByPatient

java.math.BigDecimal deductiblePaidByPatient

Deductible paid by the patient.

paidByPayer

java.math.BigDecimal paidByPayer

Amount otherwise paid by the primary payer.

paidBySecondaryPayer

java.math.BigDecimal paidBySecondaryPayer

Amount otherwise paid by the secondary payer.

patientOutOfPocket

java.math.BigDecimal patientOutOfPocket

Amount otherwise paid by the patient out of pocket.

Class org.mitre.synthea.world.concepts.Claim.ClaimEntry extends Claim.ClaimCost implements Serializable

serialVersionUID:

1871121895630816723L

Serialized Fields

entry

HealthRecord.Entry entry

The health record entry associated with this claim entry.

Class org.mitre.synthea.world.concepts.Employment extends java.lang.Object implements Serializable

Serialized Fields

chanceOfUnemployment

double chanceOfUnemployment

The chance that an employed person becomes unemployed

nextTimeToCheck

long nextTimeToCheck

How long to wait before checking if the person should become unemployed

unemployed

boolean unemployed

Whether a person is unemployed or not

Class org.mitre.synthea.world.concepts.GrowthChart extends java.lang.Object implements Serializable

Serialized Fields

chartType

GrowthChart.ChartType chartType

The chart type

femaleEntries

java.util.HashMap<java.lang.Integer,GrowthChartEntry> femaleEntries

A map of age in months to growth chart entries for female individuals.

maleEntries

java.util.HashMap<java.lang.Integer,GrowthChartEntry> maleEntries

A map of age in months to growth chart entries for male individuals.

Class org.mitre.synthea.world.concepts.GrowthChartEntry extends java.lang.Object implements Serializable

Serialized Fields

lboxCox

double lboxCox

The power in the Box-Cox transformation used for z-score calculations.

median

double median

The median value used for growth chart calculations.

scov

double scov

The generalized coefficient of variation used for z-score and percentile calculations.

Class org.mitre.synthea.world.concepts.HealthRecord extends java.lang.Object implements Serializable

Serialized Fields

death

java.lang.Long death

recorded death date/time.

demographicsAtRecordCreation

java.util.Map<java.lang.String,java.lang.Object> demographicsAtRecordCreation

The person's demographics at the time of record creation.

encounters

java.util.List<HealthRecord.Encounter> encounters

encounters in this health record

person

Person person

the person associated with the health record

present

java.util.Map<java.lang.String,HealthRecord.Entry> present

A map of ids to entries in the record

provider

Provider provider

the provider associated with the health record

Class org.mitre.synthea.world.concepts.HealthRecord.Allergy extends HealthRecord.Entry implements Serializable

Serialized Fields

allergyType

java.lang.String allergyType

The type of allergy

category

java.lang.String category

The category of allergy

reactions

java.util.HashMap<HealthRecord.Code,HealthRecord.ReactionSeverity> reactions

Map associating codes with reaction severity

Class org.mitre.synthea.world.concepts.HealthRecord.CarePlan extends HealthRecord.EntryWithReasons implements Serializable

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream ois)
                 throws java.lang.ClassNotFoundException,
                        java.io.IOException

Deserialize the care plan goals.

Throws:

java.lang.ClassNotFoundException - if the class is not found.

java.io.IOException - if deserialization fails.

writeObject

private void writeObject(java.io.ObjectOutputStream oos)
                  throws java.io.IOException

Serialize the care plan goals.

Throws:

java.io.IOException - if serialization fails.

Serialized Fields

activities

java.util.Set<HealthRecord.Code> activities

The set of activities included in the care plan.

stopReason

HealthRecord.Code stopReason

The reason for stopping the care plan.

Class org.mitre.synthea.world.concepts.HealthRecord.Code extends java.lang.Object implements Serializable

Serialized Fields

code

java.lang.String code

The code itself.

display

java.lang.String display

The human-readable description of the code.

system

java.lang.String system

Code System (e.g. LOINC, RxNorm, SNOMED) identifier (typically a URI)

valueSet

java.lang.String valueSet

A ValueSet URI that defines a set of possible codes, one of which should be selected at random.

version

java.lang.String version

An identifier for the version of the code system that this code is part of.

Class org.mitre.synthea.world.concepts.HealthRecord.Device extends HealthRecord.Entry implements Serializable

Serialized Fields

deviceIdentifier

java.lang.String deviceIdentifier

Mandatory fixed portion of UDI

expirationTime

long expirationTime

time of expiry of this device (if applicable)

lotNumber

java.lang.String lotNumber

Lot number of manufacture

manufacturer

java.lang.String manufacturer

manufacturer of the device

manufactureTime

long manufactureTime

the time the device was manufactured

model

java.lang.String model

model of the device

serialNumber

java.lang.String serialNumber

Serial number assigned by the manufacturer

udi

java.lang.String udi

UDI == Unique Device Identifier.

Class org.mitre.synthea.world.concepts.HealthRecord.Encounter extends HealthRecord.Entry implements Serializable

Serialized Fields

allergies

java.util.List<HealthRecord.Allergy> allergies

Allergies identified during the encounter.

careplans

java.util.List<HealthRecord.CarePlan> careplans

Care plans initiated or updated during the encounter.

chronicMedsRenewed

boolean chronicMedsRenewed

Track if we renewed meds at this encounter. Used in State.java encounter state.

claim

Claim claim

Claim associated with the encounter.

clinicalNote

java.lang.String clinicalNote

Clinical note associated with the encounter.

clinician

Clinician clinician

Clinician who performed the encounter.

conditions

java.util.List<HealthRecord.Entry> conditions

Conditions diagnosed during the encounter.

devices

java.util.List<HealthRecord.Device> devices

Devices implanted or assigned during the encounter.

discharge

HealthRecord.Code discharge

Discharge information for the encounter.

ended

boolean ended

Indicates whether the encounter has ended.

endedTime

long endedTime

Time when the encounter ended.

imagingStudies

java.util.List<HealthRecord.ImagingStudy> imagingStudies

Imaging studies performed during the encounter.

immunizations

java.util.List<HealthRecord.Immunization> immunizations

Immunizations administered during the encounter.

medications

java.util.List<HealthRecord.Medication> medications

Medications prescribed or administered during the encounter.

observations

java.util.List<HealthRecord.Observation> observations

Observations recorded during the encounter.

procedures

java.util.List<HealthRecord.Procedure> procedures

Procedures performed during the encounter.

provider

Provider provider

Provider responsible for the encounter.

reason

HealthRecord.Code reason

Reason for the encounter.

reports

java.util.List<HealthRecord.Report> reports

Reports generated during the encounter.

supplies

java.util.List<HealthRecord.Supply> supplies

Supplies used during the encounter.

Class org.mitre.synthea.world.concepts.HealthRecord.Entry extends java.lang.Object implements Serializable

Serialized Fields

codes

java.util.List<HealthRecord.Code> codes

List of associated codes for the entry.

cost

java.math.BigDecimal cost

Cost of the entry.

fullUrl

java.lang.String fullUrl

Cached full URL used in FHIR exporters.

name

java.lang.String name

Name of the entry.

note

java.lang.String note

Note associated with the entry.

record

HealthRecord record

Reference to the HealthRecord this entry belongs to.

start

long start

Start time of the entry.

stop

long stop

Stop time of the entry.

type

java.lang.String type

Type of the entry.

uuid

java.util.UUID uuid

Unique identifier for the entry.

Class org.mitre.synthea.world.concepts.HealthRecord.EntryWithReasons extends HealthRecord.Entry implements Serializable

Serialized Fields

reasons

java.util.List<HealthRecord.Code> reasons

A list of reason codes associated with the entry.

Class org.mitre.synthea.world.concepts.HealthRecord.ImagingStudy extends HealthRecord.Entry implements Serializable

Serialized Fields

dicomUid

java.lang.String dicomUid

A randomly assigned DICOM UID

series

java.util.List<HealthRecord.ImagingStudy.Series> series

The series of images associated with this study

Class org.mitre.synthea.world.concepts.HealthRecord.ImagingStudy.Instance extends java.lang.Object implements Serializable

Serialized Fields

dicomUid

java.lang.String dicomUid

A randomly assigned DICOM UID.

sopClass

HealthRecord.Code sopClass

A DICOM Service-Object Pair (SOP) class.

See Also:

DICOM SOP codes

title

java.lang.String title

A title for this image.

Class org.mitre.synthea.world.concepts.HealthRecord.ImagingStudy.Series extends java.lang.Object implements Serializable

Serialized Fields

bodySite

HealthRecord.Code bodySite

A SNOMED-CT body structures code.

dicomUid

java.lang.String dicomUid

A randomly assigned DICOM UID.

instances

java.util.List<HealthRecord.ImagingStudy.Instance> instances

One or more imaging Instances that belong to this Series.

maxNumberInstances

int maxNumberInstances

max

minNumberInstances

int minNumberInstances

Minimum and maximum number of instances in this series. Actual number is picked uniformly randomly from this range, copying instance data from the first instance provided.

modality

HealthRecord.Code modality

A DICOM acquisition modality code.

See Also:

DICOM modality codes

Class org.mitre.synthea.world.concepts.HealthRecord.Immunization extends HealthRecord.Entry implements Serializable

Serialized Fields

series

int series

Make the series functionally null

Class org.mitre.synthea.world.concepts.HealthRecord.Medication extends HealthRecord.EntryWithReasons implements Serializable

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream ois)
                 throws java.lang.ClassNotFoundException,
                        java.io.IOException

Java Serialization support for the prescriptionDetails field.

Throws:

java.lang.ClassNotFoundException - if the class is not found

java.io.IOException - if the deserialization fails

writeObject

private void writeObject(java.io.ObjectOutputStream oos)
                  throws java.io.IOException

Java Serialization support for the prescriptionDetails field.

Throws:

java.io.IOException - if the serialization fails

Serialized Fields

administration

boolean administration

Whether the medication is being administered

chronic

boolean chronic

Whether the medication is being taken chronically

claim

Claim claim

The claim associated with this medication

stopReason

HealthRecord.Code stopReason

The reason to stop giving the medication

Class org.mitre.synthea.world.concepts.HealthRecord.Observation extends HealthRecord.Entry implements Serializable

Serialized Fields

category

java.lang.String category

The category this observation falls under, bound by a valueset

observations

java.util.List<HealthRecord.Observation> observations

List of sub-observations

report

HealthRecord.Report report

The report this observation is part of, if any

unit

java.lang.String unit

The unit of the value

value

java.lang.Object value

The value of this observation

Class org.mitre.synthea.world.concepts.HealthRecord.Procedure extends HealthRecord.EntryWithReasons implements Serializable

Serialized Fields

clinician

Clinician clinician

The clinician who performed the procedure.

provider

Provider provider

The provider responsible for the procedure.

Class org.mitre.synthea.world.concepts.HealthRecord.Report extends HealthRecord.Entry implements Serializable

Serialized Fields

observations

java.util.List<HealthRecord.Observation> observations

The observations which comprise this report

Class org.mitre.synthea.world.concepts.HealthRecord.Supply extends HealthRecord.Entry implements Serializable

Serialized Fields

quantity

int quantity

Amount in the supply

Class org.mitre.synthea.world.concepts.NHANESSample extends java.lang.Object implements Serializable

Serialized Fields

agem

int agem

Age in months.

bmi

double bmi

BMI computed from height and weight.

ht

double ht

Height of the individual.

id

int id

NHANES ID.

prob

double prob

Weighted probability that this sample should be selected relative to the other selected samples.

racec

java.lang.String racec

Race code of the individual.

sex

int sex

Sex of the individual.

swt

double swt

Sample weight as assigned by NHANES.

wt

double wt

Weight of the individual.

Class org.mitre.synthea.world.concepts.PediatricGrowthTrajectory extends java.lang.Object implements Serializable

Serialized Fields

initialSample

NHANESSample initialSample

A sample from NHANES that is used to start the growth trajectory.

seed

long seed

The seed for the random number generator

trajectory

java.util.List<PediatricGrowthTrajectory.Point> trajectory

The trajectory of the individual, kept as a list of points containing info like age and bmi

Class org.mitre.synthea.world.concepts.PediatricGrowthTrajectory.Point extends java.lang.Object implements Serializable

Serialized Fields

ageInMonths

int ageInMonths

Age in months for the individual.

bmi

double bmi

Body Mass Index (BMI) of the individual.

timeInSimulation

long timeInSimulation

Time spent in the simulation.

Class org.mitre.synthea.world.concepts.TelemedicineConfig extends java.lang.Object implements Serializable

Serialized Fields

highEmergencyUseInsuranceNames

java.util.List<java.lang.String> highEmergencyUseInsuranceNames

List of insurance names with high emergency department utilization.

preTelemedHighEmergency

org.apache.commons.math3.distribution.EnumeratedDistribution<java.lang.String> preTelemedHighEmergency

Distribution of emergency care types before telemedicine for high emergency use insurance.

preTelemedTypicalEmergency

org.apache.commons.math3.distribution.EnumeratedDistribution<java.lang.String> preTelemedTypicalEmergency

Distribution of emergency care types before telemedicine for typical emergency use insurance.

telemedHighEmergency

org.apache.commons.math3.distribution.EnumeratedDistribution<java.lang.String> telemedHighEmergency

Distribution of emergency care types during telemedicine for high emergency use insurance.

telemedicineStartTime

long telemedicineStartTime

The time in the simulation that transitions to telemedicine should start.

telemedTypicalEmergency

org.apache.commons.math3.distribution.EnumeratedDistribution<java.lang.String> telemedTypicalEmergency

Distribution of emergency care types during telemedicine for typical emergency use insurance.

Package org.mitre.synthea.world.concepts.healthinsurance

Class org.mitre.synthea.world.concepts.healthinsurance.CoverageRecord extends java.lang.Object implements Serializable

serialVersionUID:

771457063723016307L

Serialized Fields

nextEnrollmentPeriod

java.lang.Long nextEnrollmentPeriod

The next enrollment period

person

Person person

Person that this coverage record belongs to

planHistory

java.util.Set<PlanRecord> planHistory

Unique set of plan records

Class org.mitre.synthea.world.concepts.healthinsurance.InsurancePlan extends java.lang.Object implements Serializable

Serialized Fields

activeTimeRange

org.apache.commons.lang3.Range<java.lang.Long> activeTimeRange

Start/end date of plan availablity.

deductible

java.math.BigDecimal deductible

The deductible amount for this insurance plan.

defaultCoinsurance

java.math.BigDecimal defaultCoinsurance

The default coinsurance rate for this insurance plan.

defaultCopay

java.math.BigDecimal defaultCopay

The default copay amount for this insurance plan.

id

int id

Unique identifier for the insurance plan.

incomeBasedPremium

boolean incomeBasedPremium

Indicates whether this insurance plan has an income-based premium.

insuranceStatus

java.lang.String insuranceStatus

The insurance status associated with this insurance plan.

isACA

boolean isACA

Indicates whether this insurance plan is an Affordable Care Act plan.

maxOutOfPocket

java.math.BigDecimal maxOutOfPocket

The maximum out-of-pocket cost for this insurance plan.

medicareSupplement

boolean medicareSupplement

Indicates whether this insurance plan is a Medicare supplement plan.

monthlyPremium

java.math.BigDecimal monthlyPremium

The monthly premium for this insurance plan.

payer

Payer payer

The payer associated with this insurance plan.

planEligibility

IPlanEligibility planEligibility

The eligibility criteria for this insurance plan.

priority

int priority

The priority level of this insurance plan.

servicesCovered

java.util.Set<java.lang.String> servicesCovered

The set of services covered by this insurance plan.

Class org.mitre.synthea.world.concepts.healthinsurance.PlanRecord extends java.lang.Object implements Serializable

serialVersionUID:

-547445624583743525L

Serialized Fields

coveredExpenses

java.math.BigDecimal coveredExpenses

Covered expenses for the plan record.

id

java.lang.String id

Unique identifier for the plan record.

insuranceExpenses

java.math.BigDecimal insuranceExpenses

The expenses associated with having an insurance plan: Premiums.

outOfPocketExpenses

java.math.BigDecimal outOfPocketExpenses

Any healthcare expenses not covered by insurance and paid, out of pocket, by the patient.

ownerName

java.lang.String ownerName

Name of the owner of the insurance plan.

ownership

java.lang.String ownership

Ownership type of the insurance plan.

plan

InsurancePlan plan

Primary insurance plan associated with the record.

remainingDeductible

java.math.BigDecimal remainingDeductible

Remaining deductible for the plan record.

secondaryPlan

InsurancePlan secondaryPlan

Secondary insurance plan associated with the record.

start

long start

Start time of the plan record.

stop

long stop

Stop time of the plan record.

Package org.mitre.synthea.world.geography

Class org.mitre.synthea.world.geography.Demographics extends java.lang.Object implements Serializable

Serialized Fields

ageDistribution

RandomCollection<java.lang.String> ageDistribution

Age distribution for the population

ages

java.util.Map<java.lang.String,java.lang.Double> ages

A map of age ranges to their frequency in the population.

city

java.lang.String city

The name of the city.

county

java.lang.String county

The name of the county where the city is located.

education

java.util.Map<java.lang.String,java.lang.Double> education

A map of education levels to their frequency in the population.

educationDistribution

RandomCollection<java.lang.String> educationDistribution

Eduction distribution for the population

ethnicity

double ethnicity

The percentage of the population that is of Hispanic ethnicity.

ethnicityDistribution

RandomCollection<java.lang.String> ethnicityDistribution

Ethnicity distribution for the population

gender

java.util.Map<java.lang.String,java.lang.Double> gender

A map of genders to their frequency in the population.

genderDistribution

RandomCollection<java.lang.String> genderDistribution

Gender distribution of the population

id

java.lang.String id

The unique identifier for the location.

income

java.util.Map<java.lang.String,java.lang.Double> income

A map of income ranges to their frequency in the population.

incomeDistribution

RandomCollection<java.lang.String> incomeDistribution

Income distribution for the population

population

long population

Number of people in the location.

race

java.util.Map<java.lang.String,java.lang.Double> race

A map of races to their frequency in the population.

raceDistribution

RandomCollection<java.lang.String> raceDistribution

Race distribution for the population

state

java.lang.String state

The name of the state where the city is located.

Class org.mitre.synthea.world.geography.Location extends java.lang.Object implements Serializable

serialVersionUID:

1L

Serialized Fields

city

java.lang.String city

The name of the city.

demographics

java.util.Map<java.lang.String,Demographics> demographics

Map of CityId to Demographics.

fixedCity

Demographics fixedCity

Demographics for the city represented by the above variable.

populationByCity

java.util.Map<java.lang.String,java.lang.Long> populationByCity

Cache the population by city name for performance

populationByCityId

java.util.Map<java.lang.String,java.lang.Long> populationByCityId

Cache of population by city ID for performance.

socialDeterminantsOfHealth

java.util.Map<java.lang.String,java.util.Map<java.lang.String,java.lang.Double>> socialDeterminantsOfHealth

Map of County Name to attributes and probabilities.

state

java.lang.String state

The name of the state.

totalPopulation

long totalPopulation

Total population of the location.

zipCodes

java.util.Map<java.lang.String,java.util.List<Place>> zipCodes

Cache of zip codes by city name.

Class org.mitre.synthea.world.geography.Place extends java.lang.Object implements Serializable

Serialized Fields

abbreviation

java.lang.String abbreviation

The state abbreviation. For example, OH

coordinate

java.awt.geom.Point2D.Double coordinate

Coordinate of the place.

name

java.lang.String name

The name of the place. For example, Columbus

postalCode

java.lang.String postalCode

The postal code. For example, 01001

state

java.lang.String state

The name of the state. For example, Ohio